Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021981.1 Corchorus olitorius cultivar O-4 contig22014, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7017

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1443--1479
15
2.5
15
90
0
56
40
8
13
37
1.74
3747--4066
50
6.5
49
93
1
514
38
12
28
21
1.89
3747--4066
148
2.2
149
94
0
570
38
12
28
21
1.89
3748--4066
99
3.2
99
92
1
541
37
12
28
21
1.89
4342--4415
26
2.8
27
81
4
87
13
13
27
45
1.81
6908--6951
16
2.7
17
86
13
58
65
0
31
2
1.05

Tables:   1

The End!