Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021986.1 Corchorus olitorius cultivar O-4 contig22019, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35720

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3856--3881
2
13.0
2
100
0
52
50
0
0
50
1.00
11563--11647
42
2.0
42
100
0
170
20
32
14
32
1.92
12236--12309
26
2.8
27
81
4
96
41
25
13
18
1.87
15422--15629
21
9.9
21
82
2
256
26
12
25
35
1.92
15418--15629
42
5.0
42
90
2
345
27
13
25
34
1.93
15727--15760
17
2.0
17
94
0
59
32
29
14
23
1.94
16577--16642
26
2.5
26
77
0
78
36
1
6
56
1.34
28729--28822
41
2.3
40
81
1
107
23
15
14
45
1.84
31597--31699
41
2.5
41
84
3
118
24
13
13
48
1.78
32662--32703
15
2.7
15
92
3
66
64
14
9
11
1.50

Tables:   1

The End!