Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021993.1 Corchorus olitorius cultivar O-4 contig22026, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3249

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
583--615
16
2.1
16
88
11
50
75
12
3
9
1.14
711--819
22
4.7
22
74
15
87
31
11
11
45
1.76
749--822
22
3.4
21
85
7
94
35
14
10
39
1.82
814--888
37
2.0
38
89
7
118
52
14
6
26
1.67
819--902
36
2.3
37
84
10
111
58
13
4
23
1.54
1183--1214
15
2.1
15
100
0
64
59
15
12
12
1.61

Tables:   1

The End!