Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021994.1 Corchorus olitorius cultivar O-4 contig22027, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17767

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6877--6954
27
2.9
27
90
0
129
35
25
20
17
1.95
9619--9663
2
22.5
2
82
8
56
46
2
46
4
1.35
9876--9957
15
5.4
16
68
21
52
46
0
6
47
1.27
9829--9981
30
5.3
28
70
16
82
48
0
7
43
1.32
9955--10029
14
5.4
14
73
20
68
48
0
9
42
1.35
9814--10036
44
5.2
44
76
9
182
48
0
8
42
1.34
9955--10040
25
3.0
30
74
22
103
47
0
9
43
1.35
9948--10057
55
2.0
55
89
3
168
49
0
9
41
1.34
10054--10130
32
2.4
32
80
4
84
23
15
22
38
1.92
10074--10215
32
4.4
32
82
3
99
20
23
20
35
1.96
10222--10271
21
2.3
20
83
10
55
36
16
8
40
1.77

Tables:   1

The End!