Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01002200.1 Corchorus olitorius cultivar O-4 contig02200, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1084

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
782--880
16
5.6
17
67
16
58
56
24
8
11
1.61
781--925
38
4.0
38
71
15
117
55
22
9
12
1.65
842--901
16
3.4
18
75
11
61
53
25
13
8
1.67
782--930
35
4.1
34
76
8
100
55
21
10
12
1.66
1053--1084
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!