Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022004.1 Corchorus olitorius cultivar O-4 contig22037, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8704

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1021--1069
21
2.3
21
82
6
55
14
28
16
40
1.87
2210--2252
17
2.4
18
80
11
52
79
2
9
9
1.03
3832--3876
21
2.1
21
91
0
72
15
22
28
33
1.95
4974--5173
83
2.4
84
88
2
287
46
12
12
29
1.78
5218--5286
29
2.4
29
79
11
79
52
11
5
30
1.61
5511--5542
16
1.9
17
93
6
57
68
3
6
21
1.26
5507--5548
16
2.4
18
81
18
54
73
4
4
16
1.17
6675--6720
22
2.0
23
84
12
60
54
13
4
28
1.57
7537--7858
163
2.0
164
85
3
436
31
19
19
30
1.96

Tables:   1

The End!