Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022007.1 Corchorus olitorius cultivar O-4 contig22040, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5871

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1254--1327
23
3.3
23
92
5
118
16
31
16
36
1.91
1989--2027
6
6.5
6
85
8
53
69
0
0
30
0.89
1989--2028
17
2.3
18
86
4
55
67
0
0
32
0.91
4961--4986
8
3.2
8
100
0
52
38
23
0
38
1.55

Tables:   1

The End!