Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022008.1 Corchorus olitorius cultivar O-4 contig22041, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7420

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53--116
33
2.0
32
87
9
94
31
25
23
20
1.98
3374--3474
50
2.0
50
86
3
141
21
25
10
41
1.86
5094--5229
69
2.0
70
88
4
204
22
13
15
49
1.79
6614--6638
2
12.5
2
100
0
50
52
0
0
48
1.00
6826--6939
57
2.0
55
91
3
183
32
23
2
41
1.68
7006--7085
42
1.9
42
94
0
142
28
7
15
48
1.71

Tables:   1

The End!