Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022009.1 Corchorus olitorius cultivar O-4 contig22042, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19315

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2877--2914
20
1.9
20
88
0
58
21
18
28
31
1.97
3125--3201
27
2.8
27
90
2
118
15
16
27
40
1.89
7975--8030
21
2.7
21
85
0
76
12
3
26
57
1.52
8181--8217
16
2.3
16
85
0
56
24
8
21
45
1.78
13409--13872
234
2.0
233
96
2
851
33
11
7
47
1.67

Tables:   1

The End!