Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022011.1 Corchorus olitorius cultivar O-4 contig22044, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22989

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1557--1612
28
1.9
28
82
7
67
57
8
12
21
1.62
4604--4631
13
2.2
13
100
0
56
28
35
0
35
1.58
11246--11300
19
2.8
20
75
8
58
27
5
21
45
1.74
14402--14989
302
1.9
302
99
0
1167
29
19
17
33
1.95
16160--16552
30
13.0
30
92
0
561
31
19
18
31
1.95
18617--18647
13
2.4
13
100
0
62
38
12
0
48
1.42
20087--20133
20
2.2
20
85
7
58
44
23
0
31
1.54

Tables:   1

The End!