Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022015.1 Corchorus olitorius cultivar O-4 contig22048, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25073

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
680--780
35
2.9
35
85
7
125
42
25
10
20
1.85
941--1021
42
1.9
42
94
0
144
34
29
16
19
1.94
1225--1331
35
3.1
35
85
6
128
42
27
11
19
1.85
7799--8143
172
2.0
172
100
0
690
28
17
23
31
1.97
9025--9238
109
2.0
109
95
0
383
43
13
10
32
1.78
18759--18808
24
2.1
24
96
0
91
22
24
10
44
1.83
21723--21751
10
2.9
10
100
0
58
48
0
51
0
1.00
21992--22059
34
2.0
34
100
0
136
64
5
11
17
1.45

Tables:   1

The End!