Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022016.1 Corchorus olitorius cultivar O-4 contig22049, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20087

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3727--3793
21
3.2
21
64
16
57
50
14
5
28
1.66
3715--3794
42
1.9
42
97
0
151
47
16
6
30
1.71
3860--3973
56
2.0
56
98
0
219
42
1
22
33
1.64
4458--4488
3
10.3
3
100
0
62
64
0
35
0
0.94
6277--6301
7
3.6
7
100
0
50
28
32
24
16
1.96
7333--7456
62
2.0
62
98
0
239
12
20
19
47
1.81
9021--9071
27
1.9
27
84
11
70
27
9
13
49
1.74
15769--16002
40
5.8
38
73
15
161
38
17
13
29
1.88
15753--15903
78
1.9
79
88
6
227
35
16
13
33
1.88
15753--15903
38
3.8
40
78
11
143
35
16
13
33
1.88
19868--20016
63
2.4
63
87
3
212
24
25
12
36
1.91

Tables:   1

The End!