Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022020.1 Corchorus olitorius cultivar O-4 contig22053, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26791

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3461--3631
46
3.7
46
89
3
256
39
21
25
13
1.90
3461--3631
90
1.9
93
91
3
285
39
21
25
13
1.90
5663--5693
16
1.9
16
93
0
53
3
29
3
64
1.25
8510--8705
76
2.6
76
91
2
315
21
20
11
46
1.82
9405--9496
44
2.1
44
100
0
184
34
11
22
30
1.91
10085--10203
46
3.1
34
71
25
94
42
26
9
21
1.83
10095--10183
46
1.9
46
95
0
160
38
28
7
25
1.84
10350--10440
40
2.2
42
84
5
114
35
30
12
21
1.90
10641--10701
32
1.9
32
93
0
104
18
14
19
47
1.82
20294--20436
57
2.4
58
88
3
198
44
9
17
29
1.79
22820--22906
29
2.9
29
78
13
88
22
21
13
41
1.89
22965--23016
13
3.6
13
75
22
50
28
30
26
13
1.94
22945--23022
31
2.5
32
91
2
122
32
29
24
14
1.94
23093--23147
29
1.9
28
88
3
83
43
14
21
20
1.87

Tables:   1

The End!