Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022021.1 Corchorus olitorius cultivar O-4 contig22054, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3269

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
948--1022
27
2.7
27
87
4
96
37
26
14
21
1.92
1456--2684
30
41.1
30
86
2
1465
45
18
14
21
1.85
2949--3266
71
4.5
71
88
1
420
43
18
20
17
1.89
2948--3266
36
8.9
36
83
2
392
42
18
20
18
1.89
2948--3266
143
2.2
142
87
1
440
42
18
20
18
1.89

Tables:   1

The End!