Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022025.1 Corchorus olitorius cultivar O-4 contig22058, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18169

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2453--2535
22
3.8
21
73
17
64
57
1
2
38
1.19
2455--2503
25
2.0
25
84
8
64
59
0
0
40
0.98
4026--4101
30
2.6
30
91
2
127
38
10
17
34
1.84
6376--6442
29
2.3
29
89
0
107
41
13
10
34
1.79
17398--17439
2
21.5
2
80
4
50
40
2
4
52
1.35

Tables:   1

The End!