Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01002203.1 Corchorus olitorius cultivar O-4 contig02203, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1036

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112--303
57
3.4
57
84
0
186
14
25
23
37
1.92
257--343
39
2.2
39
87
0
129
9
25
24
41
1.84
200--400
96
2.1
96
86
0
285
11
25
22
39
1.88
297--499
57
3.6
56
85
2
262
10
24
22
42
1.85
156--456
153
2.0
153
88
0
449
12
24
21
40
1.88
894--930
20
1.9
20
88
5
58
32
0
0
67
0.91

Tables:   1

The End!