Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022044.1 Corchorus olitorius cultivar O-4 contig22077, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17785

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
327--546
34
6.1
34
77
14
226
26
14
20
38
1.91
408--545
70
2.0
71
91
1
224
26
15
19
38
1.91
6295--6348
19
2.6
21
77
19
60
38
3
18
38
1.69
10001--10040
15
2.7
15
88
0
62
15
22
22
40
1.91
14244--14287
5
8.4
5
97
2
70
43
0
0
56
0.99
14246--14289
2
24.5
2
78
21
53
43
0
0
56
0.99

Tables:   1

The End!