Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022051.1 Corchorus olitorius cultivar O-4 contig22084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5225

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4304--4408
35
3.0
35
81
5
122
29
12
20
38
1.89
4422--4635
35
6.1
35
87
1
313
27
14
20
37
1.92
4336--4496
88
1.8
88
87
0
241
27
15
19
36
1.93
4422--4635
104
2.0
105
89
0
322
27
14
20
37
1.92
4561--4722
87
1.9
88
90
1
263
27
15
20
35
1.93
4649--4918
35
7.8
35
91
1
420
27
12
20
39
1.89
4422--4896
261
1.8
261
89
0
745
27
14
20
37
1.91
4310--4861
226
2.4
226
91
1
881
27
14
20
37
1.92

Tables:   1

The End!