Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022052.1 Corchorus olitorius cultivar O-4 contig22085, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16264

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2276--2309
2
17.5
2
87
6
52
50
0
2
47
1.16
2418--2747
43
7.8
43
85
5
440
20
10
25
42
1.85
2416--2747
84
3.9
84
95
0
574
21
10
25
42
1.85
14727--14827
27
3.7
27
76
7
105
16
15
28
38
1.90
15084--15118
17
2.1
17
100
0
70
28
11
5
54
1.59

Tables:   1

The End!