Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022061.1 Corchorus olitorius cultivar O-4 contig22094, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17575

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4114--4200
39
2.2
39
93
4
149
34
3
11
50
1.55
4575--4610
18
1.9
19
88
5
56
58
8
0
33
1.28
4700--4778
33
2.4
33
89
0
113
15
32
39
12
1.85
5508--5539
6
5.3
6
92
0
55
0
15
46
37
1.46
9406--9443
20
1.9
20
84
10
51
65
7
7
18
1.43
9406--9454
21
2.3
21
79
6
55
65
6
8
20
1.41
15802--15826
11
2.3
11
100
0
50
64
28
0
8
1.22
16798--16864
18
3.7
18
97
0
125
22
32
34
10
1.88

Tables:   1

The End!