Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022067.1 Corchorus olitorius cultivar O-4 contig22100, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7011

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
120--326
29
6.8
29
83
11
270
33
18
16
31
1.93
76--326
127
2.0
127
94
0
439
33
17
17
31
1.93
201--278
39
2.0
40
92
7
133
32
17
15
34
1.92
143--326
98
1.9
97
95
2
334
33
18
16
31
1.93
1021--1047
2
13.5
2
100
0
54
48
0
0
51
1.00
4731--4768
20
1.9
20
88
0
58
18
7
7
65
1.43
5639--5741
54
1.9
54
90
4
163
36
15
33
13
1.87

Tables:   1

The End!