Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022072.1 Corchorus olitorius cultivar O-4 contig22105, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21502

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1646--1759
15
7.6
15
81
5
106
13
24
27
35
1.92
1646--1759
30
3.8
31
82
4
119
13
24
27
35
1.92
2987--3055
18
3.8
18
88
0
102
11
20
40
27
1.87
3590--3731
49
3.0
47
81
9
160
49
4
16
29
1.66
14913--14945
14
2.4
14
90
10
50
3
15
0
81
0.80
15459--15492
6
5.5
6
96
3
59
82
0
17
0
0.67

Tables:   1

The End!