Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022083.1 Corchorus olitorius cultivar O-4 contig22116, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8349

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
933--1598
30
22.1
30
87
3
892
46
19
14
19
1.83
1562--1683
39
3.2
39
81
5
149
48
16
16
18
1.82
2287--2379
37
2.6
36
83
6
116
43
21
18
17
1.89
2359--2399
20
2.0
20
95
0
73
41
21
17
19
1.90
2287--2471
92
2.0
92
88
3
273
42
19
20
18
1.90
2322--2435
56
2.0
57
87
1
167
41
20
20
18
1.91
2379--2511
36
3.7
35
88
3
185
39
18
23
18
1.92
4017--4057
13
3.1
13
89
3
55
43
12
7
36
1.70
4027--4065
16
2.6
16
88
11
57
41
10
7
41
1.68
6743--6773
16
1.9
16
93
0
53
22
12
25
38
1.90

Tables:   1

The End!