Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022085.1 Corchorus olitorius cultivar O-4 contig22118, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23111

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2168--2224
20
2.6
23
75
18
66
42
12
14
31
1.82
4473--4513
6
7.2
6
97
2
68
0
0
12
87
0.53
14576--14614
9
4.6
9
81
12
55
46
2
7
43
1.46
14577--14614
16
2.4
16
95
0
67
44
2
7
44
1.47
15586--15813
74
3.1
74
91
1
343
31
17
16
35
1.92
16122--16161
19
2.0
20
85
14
55
32
2
5
60
1.32
18168--18263
30
3.2
30
88
7
124
18
8
33
39
1.81
18501--18552
26
2.0
26
96
3
97
19
11
7
61
1.53

Tables:   1

The End!