Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022089.1 Corchorus olitorius cultivar O-4 contig22122, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37519

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1453--1478
11
2.4
11
100
0
52
7
15
7
69
1.35
2238--2279
15
2.7
15
92
3
66
11
9
14
64
1.50
2690--2748
28
2.1
28
81
3
66
47
6
15
30
1.71
5895--5944
21
2.4
21
86
0
64
20
42
24
14
1.88
8467--8492
11
2.4
11
100
0
52
7
15
7
69
1.35
13392--13446
15
3.6
15
82
4
74
25
20
18
36
1.94
14210--14372
28
5.9
27
80
9
127
19
12
26
41
1.87
31178--31310
40
3.3
39
76
9
142
21
16
15
46
1.83
32230--32261
17
1.9
17
93
6
57
21
9
0
68
1.17
35161--35211
24
2.1
25
88
3
77
72
3
5
17
1.20
35639--35691
28
1.9
28
85
11
74
62
11
5
20
1.49

Tables:   1

The End!