Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022092.1 Corchorus olitorius cultivar O-4 contig22125, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32387

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
196--225
15
2.1
14
93
6
51
13
16
6
63
1.50
3101--3142
15
2.7
15
92
3
66
11
9
14
64
1.50
3489--3543
25
2.2
26
87
6
78
40
7
14
38
1.74
8548--8573
11
2.4
11
100
0
52
69
7
15
7
1.35
9161--9196
18
1.9
18
88
5
54
36
22
2
38
1.69
10943--10989
16
3.1
15
82
11
53
59
17
10
12
1.60
13311--13403
32
3.0
31
71
17
84
52
9
7
30
1.62
13498--13564
32
2.1
31
84
13
84
50
7
10
31
1.64
15258--15293
18
1.9
18
88
5
54
36
22
2
38
1.69
20548--20589
15
2.8
15
88
0
57
50
11
21
16
1.77
21641--21682
15
2.8
15
85
7
50
47
14
21
16
1.82
26536--26594
21
2.8
21
89
0
91
28
28
23
18
1.98
29347--29395
21
2.3
21
82
6
55
40
16
28
14
1.87

Tables:   1

The End!