Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022095.1 Corchorus olitorius cultivar O-4 contig22128, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34931

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2670--2699
10
3.0
10
100
0
60
90
10
0
0
0.47
4751--4796
22
2.3
19
77
22
58
13
8
15
63
1.52
4858--4894
18
2.1
18
94
0
65
48
32
8
10
1.67
4919--4953
16
2.2
16
89
0
52
68
20
0
11
1.20
11121--11163
21
1.9
22
86
13
61
16
2
2
79
0.95
21309--21568
105
2.5
106
89
3
386
40
8
9
42
1.66
22686--22927
122
2.0
122
95
1
441
45
10
21
22
1.81
27394--27443
15
3.3
15
88
0
73
14
14
48
24
1.80
30052--30097
21
2.1
22
88
4
67
36
10
26
26
1.89
30089--30165
34
2.3
34
93
4
129
37
12
14
35
1.84
30843--30888
16
2.6
18
83
16
69
67
4
23
4
1.27

Tables:   1

The End!