Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022102.1 Corchorus olitorius cultivar O-4 contig22135, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4831

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
489--528
21
1.9
21
85
10
55
17
30
5
47
1.69
2920--2979
15
4.0
15
73
0
57
31
20
35
13
1.91
4414--4469
11
4.8
11
80
10
67
50
8
5
35
1.57
4418--4469
13
4.4
13
77
15
51
46
9
5
38
1.61
4414--4469
24
2.4
23
84
3
76
50
8
5
35
1.57

Tables:   1

The End!