Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022104.1 Corchorus olitorius cultivar O-4 contig22137, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40945

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1577--1639
30
2.1
30
85
5
83
39
19
20
20
1.92
13166--13249
31
2.8
31
85
7
111
28
10
27
33
1.90
15683--15745
30
2.1
30
85
5
83
41
19
22
17
1.90
35381--35411
1
31.0
1
100
0
62
100
0
0
0
0.00
35834--35859
13
2.0
13
100
0
52
38
30
7
23
1.83
39104--39235
66
2.0
66
96
0
246
37
19
16
25
1.93

Tables:   1

The End!