Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022110.1 Corchorus olitorius cultivar O-4 contig22143, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11546

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1020--1089
36
1.9
36
91
0
113
21
10
8
60
1.55
2039--2119
39
2.0
40
90
2
128
37
3
7
51
1.48
7616--7691
9
7.8
9
73
16
62
40
1
1
56
1.16
7992--8051
29
2.1
29
100
0
120
35
16
25
23
1.95
8124--8202
24
3.1
24
83
13
113
10
11
24
54
1.66
8136--8192
28
2.0
28
96
0
105
12
10
22
54
1.68
8745--8815
32
2.2
32
89
0
106
30
30
4
33
1.77
11226--11267
15
2.7
15
96
3
75
66
14
7
11
1.43

Tables:   1

The End!