Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022113.1 Corchorus olitorius cultivar O-4 contig22146, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17069

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1917--2074
65
2.4
67
81
7
173
36
8
13
41
1.75
1972--2074
22
4.8
21
78
7
100
38
9
11
39
1.75
2788--2890
32
3.2
32
88
2
143
6
38
36
17
1.76
4336--4382
22
2.1
23
88
4
69
21
25
29
23
1.99
4922--4953
2
16.0
2
100
0
64
50
0
0
50
1.00
7176--7225
22
2.3
21
76
6
55
36
0
52
12
1.39
8349--8393
24
1.9
24
86
4
65
48
0
6
44
1.29
15783--16287
253
2.0
252
94
1
895
26
19
17
36
1.94

Tables:   1

The End!