Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022114.1 Corchorus olitorius cultivar O-4 contig22147, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33105

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2130--2206
27
2.9
27
96
0
145
18
14
25
41
1.88
4170--4203
17
1.9
18
88
5
52
61
5
14
17
1.52
18957--18992
19
1.9
18
88
5
54
33
22
2
41
1.68
20083--20465
120
3.2
118
91
4
628
25
14
18
42
1.87
20083--20465
59
6.4
59
90
3
608
25
14
18
42
1.87
20083--20465
179
2.1
179
93
1
644
25
14
18
42
1.87
21329--21354
11
2.4
11
100
0
52
7
15
7
69
1.35
22104--22145
15
2.7
15
92
3
66
11
9
14
64
1.50
22303--22439
59
2.3
59
88
1
204
26
16
16
40
1.90
22899--22940
17
2.7
15
82
13
50
73
2
2
21
1.06
24689--24784
27
3.6
27
87
5
124
16
16
28
38
1.91
29796--29850
23
2.4
23
81
6
67
12
14
5
67
1.40

Tables:   1

The End!