Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022125.1 Corchorus olitorius cultivar O-4 contig22158, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12304

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3926--4117
104
1.8
104
93
0
330
32
23
7
35
1.84
4023--4164
53
2.5
53
79
7
140
30
23
7
38
1.81
4693--4766
26
2.9
26
76
13
73
64
18
4
12
1.42
7148--7183
19
1.9
18
88
5
54
41
2
22
33
1.68
8692--8786
21
4.5
21
91
0
154
29
16
26
27
1.97
9587--9615
9
3.3
9
90
9
51
51
20
0
27
1.47
10032--10072
21
2.0
21
85
9
57
34
9
26
29
1.88
11162--11258
33
2.9
33
85
8
110
25
8
22
43
1.81
11870--11909
15
2.6
16
88
4
55
62
12
10
15
1.54

Tables:   1

The End!