Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022129.1 Corchorus olitorius cultivar O-4 contig22162, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21026

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1432--1495
28
2.3
28
94
2
112
37
9
23
29
1.86
1837--1868
15
2.1
15
94
0
55
43
0
0
56
0.99
4075--4109
15
2.3
15
95
0
61
17
5
31
45
1.71
6185--6230
21
2.1
21
88
11
67
34
8
21
34
1.84
6944--7006
30
2.1
30
88
5
92
31
11
28
28
1.91
15596--15903
37
8.3
37
81
2
296
25
16
38
19
1.92
15938--16001
30
2.1
30
82
0
74
29
12
32
25
1.92

Tables:   1

The End!