Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022135.1 Corchorus olitorius cultivar O-4 contig22168, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34247

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16282--16369
32
2.8
32
91
0
140
19
19
10
51
1.75
17250--17288
17
2.3
17
100
0
78
46
0
0
53
1.00
21168--21223
28
2.0
28
82
0
67
35
14
14
35
1.86
22220--22244
13
1.9
13
100
0
50
16
4
16
64
1.44
24353--24393
7
5.9
7
97
0
73
14
9
14
60
1.57
24939--25325
178
2.2
178
81
5
444
36
16
13
33
1.88
25991--26077
43
2.1
41
82
4
102
52
11
3
32
1.54
26498--26552
22
2.6
20
77
11
56
50
5
5
38
1.48
30153--30206
22
2.5
22
84
6
74
5
24
42
27
1.76
31588--31649
27
2.3
27
82
2
70
35
11
22
30
1.89
32995--33040
2
23.0
2
95
0
83
47
0
2
50
1.13

Tables:   1

The End!