Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022136.1 Corchorus olitorius cultivar O-4 contig22169, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9863

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1570--1606
18
2.0
19
94
5
67
64
10
13
10
1.49
2217--2252
19
1.9
19
88
5
56
25
22
8
44
1.80
3100--3137
20
1.9
19
89
5
58
34
10
5
50
1.59
4390--4463
27
2.7
27
80
2
85
21
17
22
37
1.94
8749--8793
18
2.5
19
79
17
51
68
0
2
28
1.01
8762--8800
6
6.5
6
85
11
53
71
0
0
28
0.86

Tables:   1

The End!