Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022147.1 Corchorus olitorius cultivar O-4 contig22180, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49980

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19197--19405
109
1.9
109
97
0
391
43
14
11
30
1.81
30533--30627
50
1.9
50
95
0
172
28
30
12
28
1.93
31043--31091
18
2.7
19
81
12
59
26
48
2
22
1.61
31043--31090
12
4.0
12
81
5
53
25
50
2
22
1.60
31056--31091
6
6.0
6
96
0
54
27
50
0
22
1.50
38483--38525
17
2.6
16
85
10
59
34
20
23
20
1.96
47783--47925
71
1.9
74
88
6
220
37
18
12
31
1.88
48625--48667
22
2.0
22
100
0
86
37
18
25
18
1.94

Tables:   1

The End!