Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022149.1 Corchorus olitorius cultivar O-4 contig22182, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13809

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
568--630
23
2.7
23
77
2
63
49
20
9
20
1.77
3060--3103
17
2.5
17
81
3
52
38
9
31
20
1.84
4692--4719
14
2.0
14
100
0
56
50
0
0
50
1.00
4691--4730
17
2.4
17
86
0
53
50
5
0
45
1.23
4965--5013
19
2.6
19
83
6
64
30
0
14
55
1.40
7047--7087
20
2.0
21
85
4
57
24
24
19
31
1.98
7216--7386
64
2.7
64
89
0
252
25
32
21
21
1.98
7778--7815
14
2.7
15
84
12
53
44
0
0
55
0.99
7750--7800
18
2.7
19
79
8
61
37
1
0
60
1.08
9897--9940
2
22.0
2
100
0
88
50
0
50
0
1.00
13354--13392
2
19.5
2
100
0
78
51
48
0
0
1.00
13776--13806
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!