Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022150.1 Corchorus olitorius cultivar O-4 contig22183, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21352

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3866--3964
50
2.0
50
100
0
198
34
12
25
28
1.92
7863--7887
11
2.3
11
100
0
50
36
8
20
36
1.82
8082--8133
15
3.5
15
83
0
59
21
28
7
42
1.80
10989--11024
2
18.0
2
88
11
56
50
2
0
47
1.15
11593--11617
5
5.0
5
100
0
50
40
0
20
40
1.52
14495--14596
29
3.5
28
70
13
89
32
17
20
29
1.96
14464--14622
60
2.7
60
91
3
241
37
16
16
29
1.91
14524--14622
31
3.3
31
70
16
107
37
18
18
26
1.93
17066--17104
21
2.0
20
90
10
62
35
12
15
35
1.86
19256--19283
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!