Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022179.1 Corchorus olitorius cultivar O-4 contig22212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4753

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
511--586
23
3.3
23
69
20
77
38
9
23
28
1.86
491--677
46
4.1
46
92
2
295
33
10
26
30
1.89
1150--1216
27
2.5
27
97
0
125
17
22
35
23
1.95
1408--1438
16
1.9
16
93
0
53
29
22
19
29
1.98
3899--3937
15
2.5
16
87
4
53
17
10
12
58
1.61

Tables:   1

The End!