Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022181.1 Corchorus olitorius cultivar O-4 contig22214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8230

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1007--1039
17
1.9
17
93
0
57
45
27
0
27
1.54
2713--2820
57
1.9
56
94
1
189
35
23
1
39
1.65
2859--2921
31
2.0
31
100
0
126
38
3
22
36
1.70
2917--2997
42
1.9
42
94
0
144
28
8
16
46
1.76
4812--4860
25
2.0
25
100
0
98
32
20
32
14
1.92
6647--6688
21
2.0
21
86
9
59
16
0
35
47
1.47

Tables:   1

The End!