Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022187.1 Corchorus olitorius cultivar O-4 contig22220, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32813

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2964--2989
11
2.4
11
100
0
52
69
7
15
7
1.35
7511--7744
120
2.0
120
97
0
441
30
24
14
30
1.95
16043--16092
4
12.0
4
80
4
55
66
2
0
32
1.03
17317--17353
19
1.9
19
94
0
65
27
10
16
45
1.80
18304--18344
21
2.0
21
95
4
75
36
9
24
29
1.87
18694--18760
30
2.2
30
97
0
125
38
17
2
40
1.65
21222--21272
19
2.7
19
77
14
61
50
1
0
47
1.12
21631--21656
13
2.0
13
100
0
52
53
30
0
15
1.42
22248--22275
12
2.3
12
100
0
56
42
21
0
35
1.53
31336--31394
31
1.9
31
89
0
91
32
8
20
38
1.83

Tables:   1

The End!