Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022188.1 Corchorus olitorius cultivar O-4 contig22221, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8582

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
196--470
96
2.8
96
84
4
347
29
28
13
29
1.94
190--492
49
6.2
49
82
3
326
27
27
15
29
1.96
206--470
145
1.8
146
81
5
331
28
27
13
30
1.94
470--717
41
6.1
41
78
6
254
12
25
21
40
1.88
468--703
82
2.9
82
85
2
314
12
25
22
39
1.89
4280--4328
15
3.3
15
77
11
55
71
0
26
2
0.97
6217--6279
24
2.6
24
100
0
126
22
31
23
22
1.98
6352--6519
32
5.3
32
81
1
194
25
17
23
33
1.96

Tables:   1

The End!