Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022195.1 Corchorus olitorius cultivar O-4 contig22228, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14774

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5323--5360
3
12.7
3
100
0
76
68
0
0
31
0.90
6376--6549
38
4.6
38
94
2
287
29
13
14
41
1.85
6610--6681
27
2.7
27
100
0
144
23
27
19
29
1.98
6637--6787
67
2.3
66
85
5
189
25
20
17
35
1.95
6699--6755
28
2.0
28
93
0
96
26
22
14
36
1.92
8781--8816
19
1.9
18
88
5
54
27
22
8
41
1.82
10327--10387
30
2.1
28
88
11
88
60
4
13
21
1.51
10411--10440
14
2.1
14
93
0
51
56
13
0
30
1.37
11614--11638
12
2.1
12
100
0
50
24
20
8
48
1.76
12134--12159
13
2.0
13
100
0
52
0
30
53
15
1.42

Tables:   1

The End!