Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022200.1 Corchorus olitorius cultivar O-4 contig22233, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24801

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
380--454
27
2.8
27
97
0
141
45
25
13
16
1.83
10747--10897
74
2.1
73
85
6
198
37
10
13
37
1.80
14440--14610
22
7.8
23
70
17
78
39
7
14
38
1.73
14466--14610
22
6.7
21
71
9
87
37
6
14
41
1.73
16467--16510
22
2.0
22
100
0
88
22
27
22
27
1.99
19336--19417
41
2.0
41
97
0
155
52
4
23
19
1.65
19484--19511
13
2.2
13
100
0
56
35
0
35
28
1.58
23199--23436
29
8.1
29
79
4
228
18
17
24
39
1.92

Tables:   1

The End!