Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022203.1 Corchorus olitorius cultivar O-4 contig22236, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35169

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1709--1758
24
2.0
25
84
3
66
70
6
6
18
1.29
2206--2260
28
2.0
28
88
0
83
61
10
3
23
1.44
5262--5307
22
2.1
22
91
0
74
26
23
19
30
1.98
5470--5512
21
2.2
19
88
12
61
25
25
6
41
1.80
6136--6186
24
2.1
25
85
3
68
70
5
5
17
1.28
8032--8059
13
2.2
13
100
0
56
35
0
35
28
1.58
10927--11096
93
1.8
93
96
0
313
32
12
1
52
1.49
11624--11695
35
2.1
35
97
0
135
23
18
18
40
1.91
11737--11768
16
2.0
16
93
0
55
53
0
0
46
1.00
11723--11790
19
3.8
18
77
11
59
55
1
0
42
1.08
11828--11864
17
2.3
16
90
9
58
51
0
0
48
1.00
11903--11937
18
1.9
18
94
0
61
28
8
11
51
1.67
14313--14349
17
2.2
17
90
9
58
37
2
16
43
1.62
31704--31728
13
1.9
13
100
0
50
40
8
12
40
1.72
31773--31798
13
2.0
13
100
0
52
7
0
38
53
1.30

Tables:   1

The End!