Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022214.1 Corchorus olitorius cultivar O-4 contig22247, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15447

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3588--3612
13
1.9
13
100
0
50
40
8
4
48
1.51
5561--5606
18
2.6
18
78
0
56
45
0
2
52
1.13
9062--9092
6
5.2
6
92
0
53
80
3
16
0
0.83
11449--11514
31
2.2
30
83
2
78
37
12
22
27
1.90
12355--12384
14
2.1
14
93
0
51
60
16
3
20
1.50
14942--15426
22
22.3
22
70
15
185
35
15
10
38
1.82
15223--15346
45
2.8
44
78
12
128
38
14
8
37
1.77
15267--15419
82
1.8
84
82
8
197
37
16
7
38
1.78

Tables:   1

The End!