Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01002222.1 Corchorus olitorius cultivar O-4 contig02222, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1957

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1273--1333
2
30.0
2
86
3
86
49
0
6
44
1.28
1380--1430
22
2.4
22
90
3
77
45
3
7
43
1.51
1396--1439
22
2.0
22
82
8
54
43
6
4
45
1.51
1519--1555
18
2.1
18
90
10
58
32
10
5
51
1.60
1714--1817
46
2.3
44
85
6
138
40
13
9
36
1.77
1714--1839
68
1.9
67
85
5
173
38
15
9
36
1.80
1439--1957
22
24.1
21
69
13
202
36
15
9
39
1.80

Tables:   1

The End!