Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022220.1 Corchorus olitorius cultivar O-4 contig22253, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26732

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7188--7213
11
2.4
11
100
0
52
7
15
7
69
1.35
11028--11303
138
2.0
138
94
0
480
15
47
22
14
1.81
11461--11506
21
2.2
21
88
0
65
15
45
26
13
1.82
19151--19221
30
2.4
30
83
4
99
52
8
14
25
1.69
19744--19782
20
2.0
20
85
10
53
30
23
25
20
1.98
20695--20876
98
1.9
98
88
4
280
51
8
34
6
1.58
20912--20957
20
2.3
20
82
14
51
60
6
0
32
1.22
22110--22350
134
1.8
133
86
4
353
37
8
0
53
1.38
22584--22618
16
2.2
16
94
0
61
5
14
40
40
1.69
24699--24742
14
3.2
13
84
9
52
79
2
13
4
0.98

Tables:   1

The End!