Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022222.1 Corchorus olitorius cultivar O-4 contig22255, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17376

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2928--3517
22
27.0
22
72
14
375
37
17
8
36
1.81
2915--3517
43
13.8
44
73
14
385
37
17
8
36
1.81
2929--3512
65
8.9
65
72
13
260
37
16
9
36
1.81
3079--3199
64
1.9
64
89
0
188
39
13
7
39
1.72
4158--4183
13
2.0
13
100
0
52
38
15
15
30
1.88
4396--4489
45
2.2
44
88
7
140
38
20
5
36
1.75
5232--5277
22
2.0
23
84
12
60
58
13
0
28
1.35
5836--6037
104
2.0
102
83
8
263
46
18
14
20
1.84
8086--8121
19
1.9
19
88
5
56
30
5
5
58
1.44
14239--14399
29
5.4
29
68
15
98
37
17
17
27
1.92
14238--14396
59
2.7
58
88
3
212
37
16
17
27
1.92
14498--14604
31
3.6
29
73
16
94
29
16
18
34
1.94
14436--14600
60
2.8
60
87
0
224
30
20
16
33
1.94
15593--15643
24
2.1
24
89
7
77
47
17
19
15
1.83

Tables:   1

The End!